PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Lus10011445
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Linaceae; Linum
Family bZIP
Protein Properties Length: 374aa    MW: 41893.3 Da    PI: 5.479
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Lus10011445genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.68.4e-1187128344
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 
                  + k++rr+++NReAAr+sR RKka++++Le    +L +  ++
  Lus10011445  87 SEKVQRRLAQNREAARKSRIRKKAYVKQLESSRLKLIQLEQE 128
                  6799**************************866655555544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.0E-883133No hitNo description
SMARTSM003384.5E-685148IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.02587131IPR004827Basic-leucine zipper domain
PfamPF001704.3E-788121IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.38E-789132No hitNo description
PROSITE patternPS00036092107IPR004827Basic-leucine zipper domain
PfamPF141441.1E-28175250IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MNSSPTQFVA SGGGMELYDH VHQLSMWGEN LFKSNGSPNA LASILIPNTS PSLFISPDIK  60
FDNQSEDTSH GTPGVLTNYE QEVTKSSEKV QRRLAQNREA ARKSRIRKKA YVKQLESSRL  120
KLIQLEQELD KARQQGSYID NAVEGSNVGF SSAMNSGIAM FETEYVNWLE EQQRHVCELR  180
TALNSDISDG EIHVLVDASL NHYYELFRMK AAASKADVFY VMYGLWKSSA ERFFLWIGGF  240
RPSELIKVLR PQIEPLAEPQ LQDICNLGQL CQQAEDALSQ GMERLQQTLA QSVADGQLGE  300
AIYSPQIDTA MEKLDSLVRF VRQADHLRKV ALVQVSQILT PTQAARGLLA LGEYFDKLRA  360
LSQVWETNVR EPS*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00642SELEXTransfer from LOC107771743Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012075186.10.0PREDICTED: transcription factor TGA1-like
SwissprotQ392371e-158TGA1_ARATH; Transcription factor TGA1
TrEMBLA0A067KGJ60.0A0A067KGJ6_JATCU; Uncharacterized protein
STRINGPOPTR_0007s06180.11e-176(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF109634104
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-159bZIP family protein